PHATRDRAFT_51301 hla-b associated transcript 1 (DEADc)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_51301 chr_32 hla-b associated transcript 1 (DEADc) 18534 20148 +
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0209
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEADc DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in... cl17251 255.487 8.34E-83 47 - 251 specific 238167
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 255.487 8.34E-83 47 - 251 superfamily 266587
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 127.354 3.34E-35 267 - 392 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 127.354 3.34E-35 267 - 392 superfamily 238034
PTZ00424 helicase 45; Provisional - 252.44 4.31E-79 47 - 420 multi-dom 185609
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269556 Not available 176347 239731 433653 Cre17.g719000.t1.2 AT5G11170.2 309277
KEGG description KEGG Pathway
Not available Not available
Not available -
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