PHATRDRAFT_52750 hect (homologous to the e6-apcarboxyl terminus) domain and rcc1-like domain2 (HECTc superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_52750	chr_31	hect (homologous to the e6-apcarboxyl terminus) domain and rcc1-like domain2 (HECTc superfamily)	127320	127820	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0319

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0055	0.36	1500 14000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HECTc superfamily		HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds...	-	150.793	2.47E-44	2 - 144	superfamily	260176

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
19421		Not available	272104	300449	445432	Not available	Not available	498805

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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