PHATRDRAFT_5286 af435449_1calcium calmodulin-dependent protein kinase4 (S_TKc)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_5286	chr_20	af435449_1calcium calmodulin-dependent protein kinase4 (S_TKc)	370425	371069	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0387

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0162	0.30	0.00000051 3200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PKc		Catalytic domain of Protein Kinases; Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the...	cl09925	147.383	1.11E-43	8 - 210	specific	173623
PKc_like superfamily		Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the...	-	147.383	1.11E-43	8 - 210	superfamily	263920
S_TKc		Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-...	-	171.944	9.35E-53	2 - 215	multi-dom	214567

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269297		Not available	179410	253835	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments