PHATRDRAFT_53933 (ABC_ATPase superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_53933 chr_1 (ABC_ATPase superfamily) 138147 142116 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0096

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0196
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 149.707 2.20E-40 972 - 1155 superfamily 266551
MutS_I superfamily MutS domain I; This domain is found in proteins of the MutS family (DNA mismatch repair proteins)... - 68.3707 2.75E-13 308 - 405 superfamily 250754
DNA_pol_A superfamily Family A polymerase primarily fills DNA gaps that arise during DNA repair, recombination and... - 41.2526 0.00110588 98 - 169 superfamily 261379
MutS Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair] - 148.587 1.35E-36 308 - 1181 multi-dom 223327

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264816 Not available 196611 186574 205782 Cre06.g250850.t1.1 AT3G24320.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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