PHATRDRAFT_53939 prosomal p27k protein (proteasome_alpha_type_6)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_53939 chr_1 prosomal p27k protein (proteasome_alpha_type_6) 277172 278023 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0183

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0131
 0.25

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
proteasome_alpha_type_6 proteasome_alpha_type_6. The 20S proteasome, multisubunit proteolytic complex, is the central... cl00467 326.884 2.95E-113 7 - 217 specific 239723
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 326.884 2.95E-113 7 - 217 superfamily 260443
PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,... - 176.334 3.88E-54 7 - 239 multi-dom 223711

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
11068 Not available 267879 261904 446206 Cre17.g705400.t1.2 AT5G35590.1 285915

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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