PHATRDRAFT_5396 u7 family protein (S49_Sppa_N_C)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_5396	chr_11	u7 family protein (S49_Sppa_N_C)	692794	693288	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0150

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0142	0.29	510 3600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
S49_Sppa_N_C		Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad; Signal peptide...	cl15763	166.894	4.95E-52	1 - 165	specific	132934
Clp_protease_like superfamily		Caseinolytic protease (ClpP) is an ATP-dependent protease; Clp protease (caseinolytic protease;...	-	166.894	4.95E-52	1 - 165	superfamily	265774

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
261093		Not available	152639	301793	Not available	Cre10.g444550.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments