PHATRDRAFT_54066 vesicle transport protein (Longin)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54066 chr_1 vesicle transport protein (Longin) 2477739 2478614 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0117

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Longin superfamily Regulated-SNARE-like domain; Longin is one of the approximately 26 components required for... - 82.6074 1.87E-20 37 - 126 superfamily 258059
Longin superfamily Regulated-SNARE-like domain; Longin is one of the approximately 26 components required for... - 82.6074 1.87E-20 37 - 126 superfamily 258059
Synaptobrevin superfamily Synaptobrevin; Synaptobrevin. - 67.5644 4.69E-15 144 - 223 superfamily 250253
Synaptobrevin superfamily Synaptobrevin; Synaptobrevin. - 67.5644 4.69E-15 144 - 223 superfamily 250253
SNC1 Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion] - 71.3056 1.24E-15 12 - 194 multi-dom 227472

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
30919 Not available 178992 196307 236388 Cre12.g554700.t1.2 AT1G11890.1 529447

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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