PHATRDRAFT_54330 multi-sensor signal transduction histidine kinase (COG4251)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54330 chr_5 multi-sensor signal transduction histidine kinase (COG4251) 774721 777909 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0479

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0022
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... cl19078 79.5421 2.65E-17 884 - 993 specific 238088
REC superfamily Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... - 79.5421 2.65E-17 884 - 993 superfamily 267431
HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... cl00075 64.9754 2.45E-12 700 - 848 specific 238030
HATPase_c superfamily Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... - 64.9754 2.45E-12 700 - 848 superfamily 260175
HisKA Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed... cl00080 62.23 9.95E-12 581 - 642 specific 119399
HisKA superfamily Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed... - 62.23 9.95E-12 581 - 642 superfamily 260177
GAF GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl... cl17456 62.2159 3.48E-11 200 - 361 specific 250726
GAF superfamily GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl... - 62.2159 3.48E-11 200 - 361 superfamily 266697
PHY superfamily Phytochrome region; Phytochromes are red/far-red photochromic biliprotein photoreceptors which... - 51.4453 1.23E-07 487 - 544 superfamily 249800
COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction... - 233.481 5.80E-65 29 - 853 multi-dom 226702

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22848 Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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