PHATRDRAFT_54643 ankyrin repeat (ANK)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54643 chr_11 ankyrin repeat (ANK) 426524 427914 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0346

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0032
 0.44

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 59.3194 7.13E-11 332 - 410 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 59.3194 7.13E-11 332 - 410 superfamily 238125
2OG-FeII_Oxy_3 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... cl17304 58.2043 9.64E-11 185 - 270 specific 257950
2OG-FeII_Oxy_3 superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 58.2043 9.64E-11 185 - 270 superfamily 266616
Ank_4 Ankyrin repeats (many copies); Ankyrin repeats (many copies). - 42.2376 1.94E-05 332 - 381 multi-dom 257947
Ank_4 Ankyrin repeats (many copies); Ankyrin repeats (many copies). - 42.2376 1.94E-05 332 - 381 multi-dom 257947

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23503 Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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