PHATRDRAFT_54699 dna repair exonuclease (mre11)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54699 chr_12 dna repair exonuclease (mre11) 626804 628724 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0240

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain; Mre11 (also known as SbcD in Escherichia coli... cl13995 169.468 1.10E-48 37 - 302 specific 163616
MPP_superfamily superfamily metallophosphatase superfamily, metallophosphatase domain; Metallophosphatases (MPPs), also known... - 169.468 1.10E-48 37 - 302 superfamily 265413
Mre11_DNA_bind superfamily Mre11 DNA-binding presumed domain; The Mre11 complex is a multi-subunit nuclease that is composed... - 175.453 1.03E-51 322 - 486 superfamily 252414
Mre11_DNA_bind superfamily Mre11 DNA-binding presumed domain; The Mre11 complex is a multi-subunit nuclease that is composed... - 175.453 1.03E-51 322 - 486 superfamily 252414
mre11 DNA repair protein (mre11); All proteins in this family for which functions are known are subunits... - 378.403 3.42E-126 29 - 426 multi-dom 233033

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
34332 Not available 214824 233741 98533 Cre12.g556911.t1.1 AT5G54260.1 250783

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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