PHATRDRAFT_54791 cytochrome c biogenesistransmembrane region (CcdA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54791	chr_14	cytochrome c biogenesistransmembrane region (CcdA)	709419	710567	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0486

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0015	0.37	210 87000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CcdA		Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	cl19196	93.5327	1.53E-22	107 - 361	specific	223856
TauE superfamily		Sulfite exporter TauE/SafE; This is a family of integral membrane proteins where the alignment...	-	93.5327	1.53E-22	107 - 361	superfamily	267549

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
260772		Not available	273832	308827	58635	Cre07.g357800.t1.2	AT5G54290.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments