PHATRDRAFT_54960 (SPFH_prohibitin)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54960	chr_19	(SPFH_prohibitin)	430897	434370	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0246

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0024	0.42	0.018 2.9

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SPFH_prohibitin		Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model...	cl19107	264.761	8.62E-89	26 - 221	specific	259799
SPFH_like superfamily		core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model...	-	264.761	8.62E-89	26 - 221	superfamily	267460
PHB		prohibitin homologues; prohibitin homologues	-	126.236	1.48E-35	24 - 187	multi-dom	214581

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
26224		Not available	269289	294377	Not available	Cre12.g519350.t1.2	AT5G40770.1	537928

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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