PHATRDRAFT_54973 endo--beta-glucanase precursor (GH16_laminarinase_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54973 chr_20 endo--beta-glucanase precursor (GH16_laminarinase_like) 243373 244940 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0237

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0007
 0.60

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16; Laminarinase, also known as glucan endo-1... cl00218 199.003 3.40E-60 26 - 300 specific 185693
Glyco_hydrolase_16 superfamily glycosyl hydrolase family 16; The O-Glycosyl hydrolases are a widespread group of enzymes that... - 199.003 3.40E-60 26 - 300 superfamily 260271
RPE65 superfamily Retinal pigment epithelial membrane protein; This family represents a retinal pigment epithelial... - 43.535 9.54E-05 316 - 386 superfamily 263961

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 41534 252048 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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