PHATRDRAFT_55102 phytoene desaturase (phytoene_desat)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_55102	chr_24	phytoene desaturase (phytoene_desat)	265491	267343	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0491

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0038	0.40	4.9 39000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NAD_binding_8		NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain.	cl19134	65.2099	4.07E-13	76 - 142	specific	257775
NAD_binding_8 superfamily		NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain.	-	37.6957	0.00764279	246 - 341	superfamily	267487
NAD_binding_8 superfamily		NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain.	-	37.6957	0.00764279	246 - 341	superfamily	267487
phytoene_desat		phytoene desaturase; Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a...	-	686.964	0	73 - 524	multi-dom	131778

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre12.g509650.t1.2	AT4G14210.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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