PHATRDRAFT_55162 (2OG-FeII_Oxy_3)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_55162 chr_28 (2OG-FeII_Oxy_3) 88229 89624 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0206

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 46.6078 1.05E-06 329 - 423 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 46.6078 1.05E-06 329 - 423 superfamily 238125
2OG-FeII_Oxy_3 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... cl17304 49.3447 1.01E-07 206 - 276 specific 257950
2OG-FeII_Oxy_3 superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 49.3447 1.01E-07 206 - 276 superfamily 266616
Ank_4 Ankyrin repeats (many copies); Ankyrin repeats (many copies). - 39.156 0.000172024 368 - 409 multi-dom 257947
Ank_4 Ankyrin repeats (many copies); Ankyrin repeats (many copies). - 39.156 0.000172024 368 - 409 multi-dom 257947

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 180822 256225 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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