PHATRDRAFT_55187 sensory transduction histidine kinase (REC)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_55187 chr_29 sensory transduction histidine kinase (REC) 242722 244347 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0403

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0129
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... cl19078 98.0317 2.54E-24 399 - 508 specific 238088
REC superfamily Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... - 98.0317 2.54E-24 399 - 508 superfamily 267431
HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... cl00075 85.7762 4.62E-20 199 - 357 specific 238030
HATPase_c superfamily Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... - 85.7762 4.62E-20 199 - 357 superfamily 260175
HisKA Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed... cl00080 42.5848 2.10E-05 35 - 120 specific 119399
HisKA superfamily Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed... - 42.5848 2.10E-05 35 - 120 superfamily 260177

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 199042 214747 Not available Cre06.g251250.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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