PHATRDRAFT_55198 oligosaccharyl transferase subunit (PMT_2 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_55198 chr_30 oligosaccharyl transferase subunit (PMT_2 superfamily) 50328 53425 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0096

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0153
 0.26

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 39.2891 0.000748858 842 - 890 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 39.2891 0.000748858 842 - 890 superfamily 238125
PMT_2 superfamily Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are not... - 185.676 8.81E-51 42 - 438 superfamily 267511
Ank_2 Ankyrin repeats (3 copies); Ankyrin repeats (3 copies). - 36.4651 0.00443092 825 - 888 multi-dom 257303

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261710 Not available 169299 240422 468597 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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