PHATRDRAFT_6052 cg4196-isoform c (COG2119)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_6052 chr_4 cg4196-isoform c (COG2119) 1005958 1006611 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0119

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0031
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UPF0016 superfamily Uncharacterized protein family UPF0016; This family contains integral membrane proteins of unknown... - 65.1999 2.16E-14 8 - 72 superfamily 250414
UPF0016 superfamily Uncharacterized protein family UPF0016; This family contains integral membrane proteins of unknown... - 65.1999 2.16E-14 8 - 72 superfamily 250414
UPF0016 superfamily Uncharacterized protein family UPF0016; This family contains integral membrane proteins of unknown... - 65.1999 2.16E-14 8 - 72 superfamily 250414
UPF0016 superfamily Uncharacterized protein family UPF0016; This family contains integral membrane proteins of unknown... - 65.1999 2.16E-14 8 - 72 superfamily 250414
COG2119 Predicted membrane protein [Function unknown] - 133.607 1.42E-38 7 - 216 multi-dom 225030

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36568 Not available 161178 327808 61467 Cre17.g731300.t1.2 AT5G36290.2 553793

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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