PHATRDRAFT_6151 beta 1 subunit of 20s proteasome (proteasome_beta)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_6151 chr_22 beta 1 subunit of 20s proteasome (proteasome_beta) 233834 234394 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0073

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0079
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
proteasome_beta proteasome beta subunit. The 20S proteasome, multisubunit proteolytic complex, is the central... cl00467 169.161 9.10E-53 3 - 184 specific 238893
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 169.161 9.10E-53 3 - 184 superfamily 260443
PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,... - 151.296 2.41E-45 2 - 183 multi-dom 223711

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 162196 202208 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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