PHATRDRAFT_8659 adp-ribosylation factor 3 (Arl1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_8659 chr_1 adp-ribosylation factor 3 (Arl1) 1282494 1283124 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0189

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0091
 0.41

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Arl1 ADP ribosylation factor 1 (Arf1); Arl1 subfamily. Arl1 (Arf-like 1) localizes to the Golgi complex... cl17170 298.553 5.95E-104 19 - 176 specific 206718
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 298.553 5.95E-104 19 - 176 superfamily 266525
COG1100 GTPase SAR1 and related small G proteins [General function prediction only] - 101.191 1.66E-26 13 - 179 multi-dom 224025

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
37988 Not available 186009 300375 Not available Cre12.g535900.t1.1 AT2G24765.1 314739

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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