PHATRDRAFT_8970 probable sensor response regulator hybrid (REC)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_8970	chr_1	probable sensor response regulator hybrid (REC)	1705377	1705748	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0034

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0166	0.21	5.9 50000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
REC		Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),...	cl19078	92.2537	6.93E-25	6 - 124	specific	238088
REC superfamily		Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),...	-	92.2537	6.93E-25	6 - 124	superfamily	267431
OmpR		Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain...	-	72.7149	7.60E-17	4 - 120	multi-dom	223816

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
264726		Not available	271220	306550	Not available	Not available	AT5G26594.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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