PHATRDRAFT_9538 sulfiteferredoxin dependent (PLN00178)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_9538 chr_1 sulfiteferredoxin dependent (PLN00178) 340776 342852 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0243

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0098
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NIR_SIR Nitrite and sulphite reductase 4Fe-4S domain; Sulphite and nitrite reductases are vital in the... cl19102 117.353 1.04E-30 208 - 347 specific 250346
HCP_like superfamily The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (... - 49.9431 1.80E-07 450 - 576 superfamily 267455
NIR_SIR_ferr superfamily Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key to... - 50.5872 4.88E-08 366 - 428 superfamily 251971
NIR_SIR_ferr superfamily Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key to... - 50.5872 4.88E-08 366 - 428 superfamily 251971
NIR_SIR_ferr superfamily Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key to... - 50.5872 4.88E-08 366 - 428 superfamily 251971
NIR_SIR_ferr superfamily Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key to... - 50.5872 4.88E-08 366 - 428 superfamily 251971
HCP_like superfamily The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (... - 49.9431 1.80E-07 450 - 576 superfamily 267455
PLN00178 sulfite reductase - 1072.07 0 14 - 593 multi-dom 177773

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22293 Not available 176315 55911 470997 Cre16.g693202.t1.1 AT5G04590.1 552537

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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