PHATRDRAFT_bd1240
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_bd1240 bd_21x34 2367 4777 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
gag_pre-integrs superfamily GAG-pre-integrase domain; This domain is found associated with retroviral insertion elements and... - 53.1296 1.09E-08 307 - 374 superfamily 258228
gag_pre-integrs superfamily GAG-pre-integrase domain; This domain is found associated with retroviral insertion elements and... - 53.1296 1.09E-08 307 - 374 superfamily 258228
rve superfamily Integrase core domain; Integrase mediates integration of a DNA copy of the viral genome into the... - 51.1801 8.99E-08 402 - 527 superfamily 250040
rve superfamily Integrase core domain; Integrase mediates integration of a DNA copy of the viral genome into the... - 51.1801 8.99E-08 402 - 527 superfamily 250040
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 39.5041 0.00142811 43 - 94 superfamily 260398
ClassIIa_HDAC_Gln-rich-N superfamily Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5... - 38.4997 0.00499426 696 - 778 superfamily 265191

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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