10136 PRK00409
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
10136 chr_15 PRK00409 364243 368879 + PRK00409
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0031
Normalized Mean Residue
Thaps_bicluster_0092
0.42
(bd841) Abhydrolase_6
0.8958
hypothetical protein
0.8501
SPRY_RanBP_like
0.8394
(bd874) NA
0.8339
COG4581
0.8336
NA
0.8244
E3_UbLigase_R4 superfamily
0.8239
Peptidase_M14_like superfamily
0.8219
DUF3510
0.8192
DUF3510
0.8173
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 237.146 4.18E-71 744 - 944 superfamily 266551
PRK00409 recombination and DNA strand exchange inhibitor protein; Reviewed - 418.461 4.76E-129 485 - 1279 multi-dom 234750
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47730 PHATRDRAFT_47730 179483 317588 466079 Cre01.g040350.t1.1 AT1G65070.2 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003684 GO:0005524 GO:0006298 GO:0006259 -

damaged DNA binding

Details: 
Interacting selectively and non-covalently with damaged DNA.
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

mismatch repair

Details: 
A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
GO Category: 
BP

DNA metabolic process

Details: 
Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.
GO Category: 
BP
Log in to post comments