10278 YihA_EngBThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10278	chr_15	YihA_EngB	796175	797843	+	YihA_EngB

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443976	Thaps10278.1, Thaps10278.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0227

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0188	0.22	16 11

Most Highly Correlated Transcripts

25473 SpoU_methylase 0.9399	21959 hypothetical protein 0.9149	34021 Methyltrn_RNA_3 0.912	3944 COG0218 0.9098	269917 TrmA 0.9081	23679 Diphthamide_syn superfamily 0.9075
22499 TrmA 0.9073	24429 PRMT5 superfamily 0.9057	42821 PRK14333 0.9051	22417 Sun 0.9024

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
YihA_EngB		YihA (EngB) GTPase family; The YihA (EngB) subfamily of GTPases is typified by the E. coli YihA, an...	cl17170	138.797	1.67E-38	205 - 492	specific	206665
Ras_like_GTPase superfamily		Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase...	-	138.797	1.67E-38	205 - 492	superfamily	266525

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_47595	PHATRDRAFT_47595	Not available	322087	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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