10604 NADB_Rossmann superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10604 chr_17 NADB_Rossmann superfamily 203053 204008 - NADB_Rossmann superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444186 Thaps10604.2, Thaps10604.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0071

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0027
 0.38

Most Highly Correlated Transcripts

bd1645

(bd1645) tpt
0.9489

bd1342

(bd1342) psaL
0.9347

bd218

(bd218) Chloroa_b-bind superfamily
0.9201

bd1820

(bd1820) Fasciclin
0.9161

bd1350

(bd1350) psaF
0.9135

bd1304

(bd1304) Ycf4
0.9129

bd1387

(bd1387) psbE
0.9116

bd783

(bd783) Rieske superfamily
0.9106

bd1160

(bd1160) Chloroa_b-bind superfamily
0.909

bd1306

(bd1306) NA
0.9072

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 79.2115 1.13E-17 22 - 267 superfamily 263925
WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate... - 75.3637 4.78E-16 22 - 266 multi-dom 223528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_34681 PHATRDRAFT_34681 186406 296137 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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