11084 plant_peroxidase_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11084 chr_19a_19 plant_peroxidase_like 86809 92799 - plant_peroxidase_like

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0234

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0010
 0.38

Most Highly Correlated Transcripts

4082

hypothetical protein
0.7892

11418

hypothetical protein
0.7633

25498

E3_UbLigase_R4 superfamily
0.7538

25811

hypothetical protein
0.7492

22620

(Tp_AP2-EREBP1) regulator [Rayko]
0.7486

270222

0.7456

25485

hypothetical protein
0.7443

24828

CAP_GLY
0.7414

11077

FG-GAP_2
0.7377

269263

(DHC1_2) DHC_N2
0.7359

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases; Along with animal peroxidases, these... cl00196 81.0457 1.54E-16 1197 - 1503 specific 173823
plant_peroxidase_like superfamily Heme-dependent peroxidases similar to plant peroxidases; Along with animal peroxidases, these... - 81.0457 1.54E-16 1197 - 1503 superfamily 260251
FG-GAP_2 superfamily FG-GAP repeat; FG-GAP repeat. - 62.1109 1.51E-11 808 - 859 superfamily 258488
FG-GAP_2 superfamily FG-GAP repeat; FG-GAP repeat. - 62.1109 1.51E-11 808 - 859 superfamily 258488
FG-GAP_2 superfamily FG-GAP repeat; FG-GAP repeat. - 62.1109 1.51E-11 808 - 859 superfamily 258488
FG-GAP_2 superfamily FG-GAP repeat; FG-GAP repeat. - 62.1109 1.51E-11 808 - 859 superfamily 258488
FG-GAP_2 superfamily FG-GAP repeat; FG-GAP repeat. - 62.1109 1.51E-11 808 - 859 superfamily 258488
FG-GAP_2 superfamily FG-GAP repeat; FG-GAP repeat. - 62.1109 1.51E-11 808 - 859 superfamily 258488
FG-GAP_2 superfamily FG-GAP repeat; FG-GAP repeat. - 62.1109 1.51E-11 808 - 859 superfamily 258488
FG-GAP_2 superfamily FG-GAP repeat; FG-GAP repeat. - 62.1109 1.51E-11 808 - 859 superfamily 258488

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2157 Not available 206381 203948 106575 Cre07.g312100.t1.1 AT4G05440.1 528425

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0007155 GO:0007160 GO:0008305 GO:0004601 GO:0006979 -

GO:0007155

cell adhesion

Details: 
The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
GO Category: 
BP

GO:0007160

cell-matrix adhesion

Details: 
The binding of a cell to the extracellular matrix via adhesion molecules.
GO Category: 
BP

GO:0008305

integrin complex

Details: 
A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands.
GO Category: 
CC

GO:0004601

peroxidase activity

Details: 
Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
GO Category: 
MF

GO:0006979

response to oxidative stress

Details: 
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
GO Category: 
BP

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