11331 GcvR
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11331 chr_19c_29 GcvR 57531 58613 - GcvR

Synonyms

NCBI ID Ensembl Genomes exon ID
7451825 Thaps11331.3, Thaps11331.2, Thaps11331.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0006

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0123
 0.31

Most Highly Correlated Transcripts

20405

GRX_GRXh_1_2_like
0.9159

31169

PRX_BCP
0.8892

3071

NA
0.8787

264157

CBS_pair superfamily
0.875

1291

hypothetical protein
0.8732

30986

SCO
0.8663

10353

hypothetical protein
0.8631

1899

hypothetical protein
0.8545

8737

hypothetical protein
0.8541

26991

GRX_GRXh_1_2_like
0.8495

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ACT_6 ACT domain; ACT domains bind to amino acids and regulate associated enzyme domains. cl09141 70.6278 3.48E-16 48 - 111 specific 205914
ACT superfamily ACT domains are commonly involved in specifically binding an amino acid or other small ligand... - 70.6278 3.48E-16 48 - 111 superfamily 263730
GcvR Glycine cleavage system regulatory protein [Amino acid transport and metabolism] - 85.1194 1.76E-20 50 - 221 multi-dom 225337

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45408 PHATRDRAFT_45408 163098 239744 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016597 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016597

amino acid binding

Details: 
Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
GO Category: 
MF

Add comment

Log in to post comments