11548 MDR8
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11548 chr_20 MDR8 438143 441218 - MDR8

Synonyms

NCBI ID Ensembl Genomes exon ID
7448544 Thaps11548.1, Thaps11548.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0094

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0030
 0.47

Most Highly Correlated Transcripts

bd463

(bd463) Aa_trans superfamily
0.9382

263852

SUL1
0.936

bd1893

(bd1893) NA
0.9246

10750

MDR8
0.9195

263271

0.9095

4922

Peptidases_S8_Kp43_protease
0.9093

1904

hypothetical protein
0.9038

1594

hypothetical protein
0.9008

23263

hypothetical protein
0.8973

24569

hypothetical protein
0.8946

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family; This... cl16912 317.668 2.47E-99 261 - 663 specific 176234
MDR superfamily Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The... - 317.668 2.47E-99 261 - 663 superfamily 266485
Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion... - 65.0615 1.97E-11 289 - 661 multi-dom 223677

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008270 GO:0016491 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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