12133 Trypan_PARPThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
12133	chr_24	Trypan_PARP	24223	31422	+	Trypan_PARP

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448920	Thaps12133.6, Thaps12133.7, Thaps12133.11, Thaps12133.12, Thaps12133.5, Thaps12133.1, Thaps12133.10, Thaps12133.9, Thaps12133.2, Thaps12133.8, Thaps12133.3, Thaps12133.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0095

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0036	0.41

Most Highly Correlated Transcripts

586 PTZ00018 0.9096	12196 hypothetical protein 0.8924	35404 PTZ00018 0.8864	3183 PTZ00018 0.8831	31391 KISc 0.8815	6947 PLN00158 0.8773
37431 PLN00157 0.8761	37309 PLN00158 0.8687	261727 KR 0.8673	33270 PLN00157 0.8629

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Trypan_PARP		Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei...	-	64.5952	1.32E-11	821 - 924	multi-dom	114603

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004339 -

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