13065 (CAT1_2) Carn_acyltransf superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
13065	chr_13	(CAT1_2) Carn_acyltransf superfamily	933923	936685	-	Carn_acyltransf superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447893	Thaps13065.4, Thaps13065.2, Thaps13065.1, Thaps13065.3, Thaps13065.5

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0456

Most Highly Correlated Transcripts

12836 EEP superfamily 0.9098	263610 COG3899 0.9037	263599 COG3899 0.901	23150 FAAL 0.8879	8130 hypothetical protein 0.8825	12183 hypothetical protein 0.877
4116 hypothetical protein 0.8753	10397 hypothetical protein 0.8688	268976 Peptidase_A22B superfamily 0.8684	15328 Solute_trans_a 0.867

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Carn_acyltransf superfamily		Choline/Carnitine o-acyltransferase; Choline/Carnitine o-acyltransferase.	-	476.02	2.24E-158	39 - 674	superfamily	250110

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_859	PHATRDRAFT_859	136697	248858	468049	Not available	Not available	470072

KEGG

KEGG description	KEGG Pathway
Peroxisome	map04146

GO Terms

GO:0008415 GO:0004092 -

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