1308 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1308	chr_1	ANK	1182781	1184421	-	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451499	Thaps1308.5, Thaps1308.2, Thaps1308.1, Thaps1308.4, Thaps1308.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0492

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0061	0.42	65 13

Most Highly Correlated Transcripts

262692 0.8565	bd1823 (bd1823) SCP superfamily 0.8542	bd387 (bd387) NA 0.7909	32716 PRK05290 0.7885	bd153 (bd153) NA 0.7649	4108 hypothetical protein 0.7618
bd453 (bd453) Mito_carr 0.7565	bd1835 (bd1835) NA 0.755	bd848 (bd848) NA 0.7231	bd764 (bd764) NA 0.7155

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	74.7274	2.66E-16	322 - 415	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	74.7274	2.66E-16	322 - 415	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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