1324 DDE_Tnp_1_7 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1324 chr_1 DDE_Tnp_1_7 superfamily 1224599 1225323 + DDE_Tnp_1_7 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442875 Thaps1324.2, Thaps1324.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0340

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0072
 0.37

Most Highly Correlated Transcripts

bd1875

(bd1875) NA
0.9011

bd1948

(bd1948) NA
0.8621

bd815

(bd815) NA
0.8486

bd1667

(bd1667) Mpp10
0.8373

bd933

(bd933) NA
0.8127

bd788

(bd788) NA
0.7898

bd1709

(bd1709) NA
0.7753

bd1788

(bd1788) NA
0.7673

bd1749

(bd1749) NA
0.7672

11403

hypothetical protein
0.7469

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DDE_Tnp_1_7 superfamily Transposase IS4; Transposase IS4. - 67.2942 1.36E-13 1 - 170 superfamily 258117

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 244373 Not available 200696 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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