13459 HslU
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
13459 chr_9 HslU 200322 202212 - HslU

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0425

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0243
 0.36

Most Highly Correlated Transcripts

20984

hypothetical protein
0.9182

28651

(AAT1_1) PLN02644
0.9137

25198

HA
0.9104

263012

Ras_like_GTPase superfamily
0.904

25495

ALDH_F6_MMSDH
0.8922

bd1842

(bd1842) NA
0.8901

23987

hypothetical protein
0.8879

9173

hypothetical protein
0.8864

23047

hypothetical protein
0.8725

24460

hypothetical protein
0.8711

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 62.1635 8.97E-12 81 - 176 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 62.1635 8.97E-12 81 - 176 superfamily 267297
ClpB_D2-small C-terminal, D2-small domain, of ClpB protein; This is the C-terminal domain of ClpB protein,... cl11083 70.5503 3.91E-15 301 - 386 specific 198154
ClpB_D2-small superfamily C-terminal, D2-small domain, of ClpB protein; This is the C-terminal domain of ClpB protein,... - 70.5503 3.91E-15 301 - 386 superfamily 264218
HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein... - 158.581 2.32E-43 42 - 387 multi-dom 224141

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2467 PHATRDRAFT_11217 PHATRDRAFT_11217 259595 253418 236065 Cre16.g663350.t1.2 AT5G53350.1 554819

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0000166 GO:0017111 GO:0005515 GO:0015031 GO:0016887 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0015031

protein transport

Details: 
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

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