13909 EHDThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
13909	chr_6	EHD	1731129	1732987	+	EHD

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444590	Thaps13909.3, Thaps13909.2, Thaps13909.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0188

Most Highly Correlated Transcripts

25041 hypothetical protein 0.9049	10232 hypothetical protein 0.8984	261357 NAD_binding_8 superfamily 0.8835	30149 Solute_trans_a 0.8826	9860 hypothetical protein 0.8744	8509 hypothetical protein 0.8739
bd654 (bd654) Sec1 superfamily 0.8725	10058 hypothetical protein 0.8724	6592 TroA-like superfamily 0.8694	4445 hypothetical protein 0.8621

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EHD		Eps15 homology domain (EHD), C-terminal domain; Dynamin-like C-terminal Eps15 homology domain (EHD...	cl17170	329.619	1.50E-109	140 - 384	specific	206740
Ras_like_GTPase superfamily		Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase...	-	329.619	1.50E-109	140 - 384	superfamily	266525

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0003924 GO:0005525 GO:0004799 GO:0050757 -

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