15007 Pumilio superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
15007 chr_7 Pumilio superfamily 102501 104140 + Pumilio superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0464
Normalized Mean Residue
Thaps_bicluster_0050
0.45
(bd467) Cytochrome_b_N
0.8744
(bd2073) psbB
0.8647
(bd1652) ABC_ATPase superfamily
0.852
(bd1563) atpB
0.8511
(bd1092) NA
0.8437
(bd1304) Ycf4
0.8426
(bd466) cytochrome_b_C
0.8363
(bd1387) psbE
0.8319
(bd1465) PKc_like superfamily
0.8276
(bd2088) rbcL
0.8243
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Pumilio superfamily Pumilio-family RNA binding domain; Puf repeats (also labelled PUM-HD or Pumilio homology domain)... - 265.224 2.23E-84 156 - 450 superfamily 153420
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003723 GO:0016071 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

mRNA metabolic process

Details: 
The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
GO Category: 
BP
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