1600 Glyco_tranf_GTA_type superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1600	chr_1	Glyco_tranf_GTA_type superfamily	1942145	1943822	-	Glyco_tranf_GTA_type superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445012	Thaps1600.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0064

Most Highly Correlated Transcripts

13448 Sec1 0.9134	12836 EEP superfamily 0.9016	7627 SPRY 0.8972	4091 hypothetical protein 0.8959	262675 AAA 0.895	22318 hypothetical protein 0.8934
12899 AAA 0.8864	2328 hypothetical protein 0.8841	263997 (APA1) Adaptin_N 0.8829	33072 Sec1 0.8814

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Glyco_tranf_GTA_type superfamily		Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a...	-	273.821	1.47E-86	139 - 526	superfamily	264347

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_54844	PHATRDRAFT_54844	189180	317966	460566	Not available	AT4G38240.2	Not available

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

GO:0000139 GO:0003827 GO:0006487 -

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