17673 DUF4033Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
17673	chr_1	DUF4033	2880751	2881815	-	DUF4033

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445118	Thaps17673.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0096

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0067	0.47	12 0.35

Most Highly Correlated Transcripts

268908 Trans_IPPS_HH 0.9237	36669 TPT 0.9036	28125 PLN00203 0.9023	26991 GRX_GRXh_1_2_like 0.9013	22673 NA 0.8978	36641 Aldolase_Class_I superfamily 0.8974
268192 Zip superfamily 0.8936	33353 TRX_family 0.8927	264109 fabG 0.8886	263776 IMPase 0.8885

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF4033 superfamily		Domain of unknown function (DUF4033); This presumed domain is functionally uncharacterized. This...	-	138.182	2.93E-40	208 - 291	superfamily	257583
DUF4033 superfamily		Domain of unknown function (DUF4033); This presumed domain is functionally uncharacterized. This...	-	138.182	2.93E-40	208 - 291	superfamily	257583

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_31748	PHATRDRAFT_31748	163430	119560	198494	Cre10.g426350.t1.1	AT4G01995.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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