17687 AAA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
17687 chr_11a AAA 463218 464231 + AAA

Synonyms

NCBI ID Ensembl Genomes exon ID
7448324 Thaps17687.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0360

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0109
 0.50

Most Highly Correlated Transcripts

23101

hypothetical protein
0.8477

1440

hypothetical protein
0.8417

24172

hypothetical protein
0.8328

36835

S_TKc
0.83

21143

hypothetical protein
0.8146

4067

hypothetical protein
0.8133

bd923

(bd923) NA
0.8102

bd524

(bd524) NA
0.8077

22720

hypothetical protein
0.805

264364

PLN02929
0.7996

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 62.1635 5.99E-12 104 - 233 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 62.1635 5.99E-12 104 - 233 superfamily 267297
AAA ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety... - 62.0057 5.58E-12 104 - 236 multi-dom 214640

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 266652 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000166 GO:0017111 GO:0005524 -

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

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