18796 UMP_CMP_kin_fam
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
18796 chr_4 UMP_CMP_kin_fam 1791511 1792800 + UMP_CMP_kin_fam

Synonyms

NCBI ID Ensembl Genomes exon ID
7451941 Thaps18796.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0048

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0156
 0.33

Most Highly Correlated Transcripts

1888

hypothetical protein
0.9035

9943

hypothetical protein
0.9025

22579

Sec62 superfamily
0.8903

37539

cpn10
0.8836

268062

PRK14293
0.8759

269759

hypothetical protein
0.8683

3588

hypothetical protein
0.8682

1889

PRK00529
0.8674

4604

hypothetical protein
0.8666

21939

Aldo_ket_red
0.8665

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ADK Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (... cl17190 146.613 1.98E-41 147 - 342 specific 238713
NK superfamily Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of... - 146.613 1.98E-41 147 - 342 superfamily 266541
UMP_CMP_kin_fam UMP-CMP kinase family; This subfamily of the adenylate kinase superfamily contains examples of UMP-... - 194.115 1.81E-59 147 - 351 multi-dom 130426

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_6457 PHATRDRAFT_6457 163305 203507 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0005524 GO:0006139 GO:0019201 GO:0004127 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006139

nucleobase-containing compound metabolic process

Details: 
Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
GO Category: 
BP

GO:0019201

nucleotide kinase activity

Details: 
Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate.
GO Category: 
MF

GO:0004127

cytidylate kinase activity

Details: 
Catalysis of the reaction: ATP + (d)CMP = ADP + (d)CDP.
GO Category: 
MF

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