19311 Lumazine_synthase-I
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
19311 chr_2 Lumazine_synthase-I 2601480 2602263 + Lumazine_synthase-I

Synonyms

NCBI ID Ensembl Genomes exon ID
7452959 Thaps19311.1, Thaps19311.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0432

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0173
 0.35

Most Highly Correlated Transcripts

260936

HCO3_cotransp superfamily
0.8872

5638

hypothetical protein
0.8447

3071

NA
0.8366

6062

hypothetical protein
0.8176

37585

MECDP_synthase
0.8176

24309

hypothetical protein
0.8151

263036

HP_PGM_like
0.8147

23616

Peptidase_A22B superfamily
0.8139

25085

hypothetical protein
0.8117

8353

hypothetical protein
0.8108

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Lumazine_synthase-I lumazine synthase (6,7-dimethyl-8-ribityllumazine synthase, LS), catalyzes the penultimate step in... cl00317 183.415 1.73E-58 37 - 171 specific 187742
Lumazine_synthase-like superfamily lumazine synthase and riboflavin synthase; involved in the riboflavin (vitamin B2) biosynthetic... - 183.415 1.73E-58 37 - 171 superfamily 260349

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_7173 PHATRDRAFT_7173 165914 283375 444779 Cre02.g088850.t1.2 AT2G44050.1 560112

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004746 GO:0009231 GO:0009349 -

GO:0004746

riboflavin synthase activity

Details: 
Catalysis of the reaction: 2 6,7-dimethyl-8-(1-D-ribityl)lumazine + H(+) = 5-amino-6-(D-ribitylamino)uracil + riboflavin.
GO Category: 
MF

GO:0009231

riboflavin biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).
GO Category: 
BP

GO:0009349

riboflavin synthase complex

Details: 
An flavoprotein that catalyzes the reaction the breakdown of dimethyl(ribityl)lumazine to form riboflavin and ribitylamino-amino-dihydroxypyrimidine.
GO Category: 
CC

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