19553 PX_domain superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
19553	chr_11a	PX_domain superfamily	75591	76988	+	PX_domain superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444521	Thaps19553.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0467

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0004	0.42	0.0052 26000

Most Highly Correlated Transcripts

bd1803 (bd1803) NA 0.9065	bd1821 (bd1821) NA 0.8764	bd1891 (bd1891) COG3899 0.8699	bd1749 (bd1749) NA 0.865	11314 hypothetical protein 0.846	268213 hypothetical protein 0.8427
269233 (Tp_HSF_3.4d) HSF_DNA-bind 0.8367	32704 PKc_like superfamily 0.8327	35855 PH-like_bacteria 0.8311	bd1487 (bd1487) PLN02688 0.8306

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PX_domain superfamily		The Phox Homology domain, a phosphoinositide binding module; The PX domain is a phosphoinositide (...	-	111.131	1.92E-29	28 - 142	superfamily	261344
BAR superfamily		The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects...	-	85.4853	3.46E-19	202 - 431	superfamily	264507

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0007242 -

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