19639 Got1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
19639 chr_6 Got1 superfamily 1528181 1528657 + Got1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444545 Thaps19639.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0205

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0163
 0.38

Most Highly Correlated Transcripts

14192

PLN02449
0.9392

36037

Trypsin_2
0.9173

17214

PLN02512
0.9115

22673

NA
0.9112

268192

Zip superfamily
0.9065

35025

Lung_7-TM_R superfamily
0.9042

16075

tpt
0.9039

4357

hypothetical protein
0.9028

33950

TMEM18
0.9021

38924

PLN02627
0.8969

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Got1 superfamily Got1/Sft2-like family; Traffic through the yeast Golgi complex depends on a member of the syntaxin... - 67.8899 3.04E-15 6 - 114 superfamily 261191

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd295 PHATRDRAFT_bd295 144916 282887 460690 Cre09.g389100.t1.2 AT5G01430.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016192 -

GO:0016192

vesicle-mediated transport

Details: 
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO Category: 
BP

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