19837 AdoMet_MTases superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
19837	chr_1	AdoMet_MTases superfamily	2860338	2861822	+	AdoMet_MTases superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452573	Thaps19837.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0321

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0258	0.30	6400000 0.019

Most Highly Correlated Transcripts

586 PTZ00018 0.8274	261161 AdoMet_MTases superfamily 0.8235	32716 PRK05290 0.8061	7796 ANK 0.7709	2837 hypothetical protein 0.7663	992 hypothetical protein 0.7638
990 hypothetical protein 0.7351	261260 PHO4 0.7322	25878 PRK07206 0.7295	4320 hypothetical protein 0.7291

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AdoMet_MTases superfamily		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	-	110.631	1.49E-27	126 - 291	superfamily	266528

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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