1986 MATE_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1986 chr_1 MATE_like superfamily 2872286 2874557 - MATE_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451492 Thaps1986.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0408

Most Highly Correlated Transcripts

27813

Hid1 superfamily
0.9138

3653

hypothetical protein
0.9086

34191

CobN_like
0.9063

13448

Sec1
0.9011

17036

S_TKc
0.8876

25509

hypothetical protein
0.8873

264441

Glycos_transf_1 superfamily
0.8856

2494

UAA
0.8851

9364

hypothetical protein
0.8848

22128

DENN
0.8836

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MATE_like superfamily Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins... - 166.209 9.48E-45 246 - 685 superfamily 263758
NorM Na+-driven multidrug efflux pump [Defense mechanisms] - 141.978 2.50E-36 248 - 689 multi-dom 223608

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43134 PHATRDRAFT_43134 198333 175395 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006855 GO:0015238 GO:0015297 GO:0016020 -

GO:0006855

drug transmembrane transport

Details: 
The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0015238

drug transmembrane transporter activity

Details: 
Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO Category: 
MF

GO:0015297

antiporter activity

Details: 
Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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