19928 (RL20) Ribosomal_L20
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
19928 chr_1 (RL20) Ribosomal_L20 2399461 2399811 + Ribosomal_L20
NCBI ID Ensembl Genomes exon ID
7449054 Thaps19928.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0328
SAICAR_synt_Sc
0.9341
Chloroa_b-bind
0.9308
hypothetical protein
0.9306
PRK05279
0.9261
Methyltransf_16 superfamily
0.922
hypothetical protein
0.9193
Ribosomal_L9_N
0.919
hypothetical protein
0.9188
hypothetical protein
0.918
LSm1
0.9151
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L20 Ribosomal protein L20; The ribosomal protein family L20 contains members from eubacteria, as well... cl00393 138.001 8.01E-43 5 - 103 specific 197305
Ribosomal_L20 superfamily Ribosomal protein L20; The ribosomal protein family L20 contains members from eubacteria, as well... - 138.001 8.01E-43 5 - 103 superfamily 260401
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16511 PHATRDRAFT_16511 182726 189226 354743 Cre01.g052350.t1.1 AT1G16740.1 284863
KEGG description KEGG Pathway
Not available Not available
GO:0003723 GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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