20248 AAA_12 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20248 chr_17 AAA_12 superfamily 330007 330465 - AAA_12 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444214 Thaps20248.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0263

Most Highly Correlated Transcripts

268687

HELICc
0.8952

7588

hypothetical protein
0.8863

262528

PI3Kc_like superfamily
0.8789

25320

hypothetical protein
0.8774

268257

fabG
0.8704

30701

PRK05279
0.8699

261567

TPR
0.8698

4916

hypothetical protein
0.8675

262305

DnaJ_bact
0.8667

19059

SynMuv_product superfamily
0.8661

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 116.879 5.33E-33 14 - 121 superfamily 257490
COG1112 Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and... - 100.421 4.58E-25 14 - 125 multi-dom 224037

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27246 PHATRDRAFT_27246 188759 209792 463659 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments