2028 ATS1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2028 chr_1 ATS1 2993566 2995564 - ATS1

Synonyms

NCBI ID Ensembl Genomes exon ID
7447605 Thaps2028.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0410

Most Highly Correlated Transcripts

5869

hypothetical protein
0.8903

5519

hypothetical protein
0.8854

9036

hypothetical protein
0.8793

5875

hypothetical protein
0.8786

25451

AAA superfamily
0.8765

21090

hypothetical protein
0.8723

11695

hypothetical protein
0.8686

5604

hypothetical protein
0.8678

22857

hypothetical protein
0.8667

8287

hypothetical protein
0.8633

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome... - 71.0224 2.98E-13 292 - 581 multi-dom 227511

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47675 PHATRDRAFT_47675 273874 207003 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008766 GO:0016881 GO:0018169 -

GO:0008766

UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity

Details: 
Catalysis of the reaction: ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate + D-alanyl-D-alanine = ADP + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanyl-D-alanine.
GO Category: 
MF

GO:0016881

acid-amino acid ligase activity

Details: 
Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
GO Category: 
MF

GO:0018169

ribosomal S6-glutamic acid ligase activity

Details: 
Catalysis of the posttranslational transfer of one or more glutamic acid residues to the C-terminus of ribosomal protein S6.
GO Category: 
MF

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