20719 ArfGap
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20719 chr_1 ArfGap 965438 966857 - ArfGap

Synonyms

NCBI ID Ensembl Genomes exon ID
7445302 Thaps20719.2, Thaps20719.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0466

Most Highly Correlated Transcripts

13448

Sec1
0.8914

7627

SPRY
0.884

262675

AAA
0.8789

12836

EEP superfamily
0.8751

12899

AAA
0.8735

2186

ERG4_ERG24 superfamily
0.8723

33072

Sec1
0.87

1600

Glyco_tranf_GTA_type superfamily
0.8697

5717

(Tp_CBF/NF2) H4 superfamily
0.8686

bd176

(bd176) PP2Cc
0.8683

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ArfGap Putative GTPase activating protein for Arf; Putative zinc fingers with GTPase activating proteins (... cl02464 140.834 2.09E-40 32 - 142 specific 250600
ArfGap superfamily Putative GTPase activating protein for Arf; Putative zinc fingers with GTPase activating proteins (... - 140.834 2.09E-40 32 - 142 superfamily 261296
COG5347 GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated... - 134.136 9.36E-36 32 - 328 multi-dom 227651

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 272466 182666 415734 Cre17.g715350.t1.2 AT4G17890.1 345549

KEGG

KEGG description KEGG Pathway
Endocytosis map04144

GO Terms

GO:0043087 -

GO:0043087

regulation of GTPase activity

Details: 
Any process that modulates the rate of GTP hydrolysis by a GTPase.
GO Category: 
BP

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