20823 nt_trans superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20823 chr_1 nt_trans superfamily 1471646 1473397 - nt_trans superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451511 Thaps20823.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0363

Most Highly Correlated Transcripts

13448

Sec1
0.926

261400

NA
0.8996

16295

FBPase
0.8973

264441

Glycos_transf_1 superfamily
0.8829

269504

(ACT4) ACTIN
0.8812

269159

DPG_synthase
0.8784

21229

hypothetical protein
0.8777

21227

hypothetical protein
0.8773

264556

FBPase
0.8748

35668

NADB_Rossmann superfamily
0.8735

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 118.054 3.47E-31 408 - 540 superfamily 260139

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44584 PHATRDRAFT_44584 190693 6754 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009058 GO:0016779 GO:0004105 -

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016779

nucleotidyltransferase activity

Details: 
Catalysis of the transfer of a nucleotidyl group to a reactant.
GO Category: 
MF

GO:0004105

choline-phosphate cytidylyltransferase activity

Details: 
Catalysis of the reaction: CTP + choline phosphate = diphosphate + CDP-choline.
GO Category: 
MF

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